Job Description P76373 Confidence 96.40% Date Thu Jan 5 12:22:27 GMT 2012 Rank 375 Aligned Residues 115 % Identity 18% Template c1j6uA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc; PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase2 murc (tm0231) from thermotoga maritima at 2.3 a resolution Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.									.
Query SS confidence														.									.
Query Sequence		K	I	T	I	S	G	T	G	Y	V	G	L	.	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I	I
Query Conservation														.									.
Alig confidence														.									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		K	I	H	F	V	G	I	G	G	I	G	X	S	A	V	A	L	H	E	F	S	N	G	N	D	V	Y	G	S	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	T	E	R	T	A	Y	L	R	K	L	G	I	P	I	F	V	P	H	S	A	D	N	.	W	Y	D	P	D	L	V	I	K
Template Known Secondary structure							T	T	T	S													T	T								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											T	T					S	S			T	T	S	.					S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.																.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.
		80	.	.	.	.	.	.								.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		A	T	P	T	D	Y	D	.	.	.	.	.	.	.	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																								.
Template Conservation																																							.
Template Sequence		T	P	A	V	R	D	D	N	P	E	I	V	R	A	R	X	E	R	V	P	I	E	N	R	L	H	Y	F	R	D	T	L	K	R	E	K	K	.	E	E	F	A	V	T	G	T	D	G	K	T	T	T	T	A	X	V	A	H	V	L	K
Template Known Secondary structure			T	T			T	T										T	T																				.								S	S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions