Job Description P76373 Confidence 99.87% Date Thu Jan 5 12:22:27 GMT 2012 Rank 35 Aligned Residues 246 % Identity 16% Template c1i36A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein mth1747; PDBTitle: structure of conserved protein mth1747 of unknown function2 reveals structural similarity with 3-hydroxyacid3 dehydrogenases Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	T	L	D	K	N	E	A	Y	R	D	A	D	Y	V	I	I
Query Conservation																							.
Alig confidence																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	V	G	F	I	G	F	G	E	V	A	Q	T	L	A	S	R	L	R	S	R	G	V	E	V	V	T	S	L	E	G	R	S	P	S	T	I	E	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	V	G	V	T	E	T	S	E	E	D	V	Y	S	C	P	V	V	I	S
Template Known Secondary structure								S		S													T	T								T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T											T	S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	S	V	E	S	V	I	K	D	V	V	E	I	N	P	Y	A	V	M	V	I	K	S	T	V	P	V	G	F	T	A	A	M	H	K	K	Y	R	T	E	N	I	I	F	S	P	E	F	L	R	E	G	K	A	L	Y	D	N	L	H	P	S	R	I	V
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.														.																																														.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.														.																																														.	.	.	.
Template Sequence		A	V	T	P	.	.	.	.	.	.	.	.	.	.	.	G	V	A	L	G	A	A	R	R	A	G	R	H	.	V	R	G	I	Y	V	D	I	N	N	I	S	P	E	T	V	R	M	A	S	S	L	I	E	K	G	G	F	V	D	A	A	I	M	G	S	V	R	R	K	G	A	D	I	R	.	.	.	.	I	I
Template Known Secondary structure			S		G	.	.	.	.	.	.	.	.	.	.	.	G	G										T	T	.			S						S															S	S	S									S						G	G	G			.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.														.																																														.	.	.	.
Template SS confidence
		63	.	.	.												.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		I	G	E	R	S	E	R	A	E	R	F	A	A	L	L	Q	E	G	A	I	K	Q	N	I	P	M	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	M	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	L	G	L	N	S	R	Q	I	I	E	G	V	C	L	D	.	.	.	P
Query Conservation																																																																														.	.	.
Alig confidence																		.	.	.	.	.																																																								.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		A	S	G	R	D	A	E	E	F	M	K	L	N	R	Y	G	.	.	.	.	.	L	N	I	E	V	R	G	R	E	P	G	D	A	S	A	I	K	M	L	R	S	S	Y	T	K	G	V	S	A	L	L	W	E	T	L	T	A	A	H	R	L	G	L	E	E	D	V	L	E	M	L	E	Y	T	E	G	N	D	F
Template Known Secondary structure				S	T	T						G	G	G	G	G	T	.	.	.	.	.							S	S	S	T	T																														T	T											T	T	S		S	S	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		R	I	G	N	H	Y	N	N	P	S	F	G	Y	G	G	Y	C	L	P	K	D	T	K	Q	L	L	.	A	N	Y	Q	S	V	P	N	N	L	I	S	A	I	V	D	A	N	R	T	R	K	D
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		R	E	S	A	I	S	R	L	K	S	S	C	I	H	A	R	R	R	Y	E	E	M	K	E	V	Q	D	M	L	A	E	V	I	D	P	V	M	P	T	C	I	I	R	I	F	D	K	L	K	D
Template Known Secondary structure															T																	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions