Job Description P76373 Confidence 95.46% Date Thu Jan 5 12:22:27 GMT 2012 Rank 455 Aligned Residues 92 % Identity 11% Template c1gthD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil Resolution 2.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.								.	.	.	.
Predicted Secondary structure																						.				.																										.	.	.	.	.															.	.	.	.	.	.	.
Query SS confidence																						.				.																										.	.	.	.	.															.	.	.	.	.	.	.
Query Sequence		K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	L	L	I	A	Q	.	N	H	E	.	V	V	A	L	D	I	L	P	S	R	V	A	M	L	N	D	R	I	S	P	I	V	D	K	E	.	.	.	.	.	I	Q	Q	F	L	Q	S	D	K	I	H	F	N	A	.	.	.	.	.	.	.	T	L	D	K
Query Conservation																						.				.																										.	.	.	.	.															.	.	.	.	.	.	.
Alig confidence																						.				.																										.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	A	L	L	G	A	G	P	A	S	I	S	C	A	S	F	L	A	R	L	G	Y	S	D	I	T	I	F	E	K	Q	E	Y	V	G	G	L	S	T	S	E	I	P	Q	F	R	L	P	Y	D	V	V	N	F	E	I	E	L	M	K	D	L	G	V	K	I	I	C	G	K	S	L	S	E	N	E	I	T	L
Template Known Secondary structure									S														T									S	S	S	S		S	T					T	S		T	T	T	S														T	T	T						S			B	S	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		68	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		N	E	A	Y	R	D	.	A	D	Y	V	I	I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		N	T	L	K	E	E	G	Y	K	A	A	F	I	G	I	G	L	P	E	P	K	T	D	D	I	F	Q
Template Known Secondary structure							T	T																	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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