Job Description P37645 Confidence 3.14% Date Thu Jan 5 11:56:17 GMT 2012 Rank 11 Aligned Residues 52 % Identity 15% Template c2qtsA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acid-sensing ion channel; PDBTitle: structure of an acid-sensing ion channel 1 at 1.9 a resolution and low2 ph Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	A	G	K	I	T	A	A	I	S	G	A	F	L	L	L	I	V	V	A	I	I	L	I	A	T	F	D	W	N	R	L	K	P	T	I	N	Q	K	V	S	A	E	L	N	R	P	F	A	I	R	G	D	L	G	V	V	W	E	R	Q	K	Q	E	T	G	W	R	S	W	V	P	W	P	H	V	H	A
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	R	V	V	W	A	L	C	F	M	G	S	L	A	L	L	A	L	V	C	T	N	R	I	Q	Y	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	P	H	V	T	K	.	.	.	.	.	.	.	.	.	.	.	L	D	E	V	A	A	T	R	L	T	F	P	A	V	T	F
Template Known Secondary structure																														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							.	.	.	.	.	.	.	.	.	.	.							S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70																		.	.	.	.	.	.	.												.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions