Job Description P0AEY1 Confidence 6.10% Date Thu Jan 5 11:24:35 GMT 2012 Rank 8 Aligned Residues 124 % Identity 8% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	A	S	V	Y	V	F	A	I	M	M	V	A	Y	Y	A	G	Q	L	V	M	D	T	F	G	I	S	I	P	G	L	R	I	A	G	G	L	I	V	A	F	I	G	F	R	M	L	F	P	Q	Q	K	A	I	D	S	P	E	A	K	S	K	S	E	E	L	E	D	E	P	S	A	N	I	A	F	V	P	L
Query Conservation
Alig confidence																																																			.	.	.
Template Conservation																																																			.	.	.
Template Sequence		W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	.	.	.	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R
Template Known Secondary structure		S	S					G	G	G																T	T			B																					.	.	.										T	T	S	S				T	T									T	T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		895	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.				.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	P	S	T	A	G	P	G	T	I	A	M	I	I	S	S	A	S	T	V	R	Q	S	S	T	F	A	D	W	V	L	M	V	A	P	P	L	I	F	F	L	V	A	V	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	P	I	L	M	T	S	L	A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T	V	L	A
Template Known Secondary structure																					T	T		S	S	S																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		972	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions