 |
| Job Description | P0AEY1 | | Confidence | 1.03% | Date | Thu Jan 5 11:24:35 GMT 2012 |
| Rank | 88 | Aligned Residues | 25 |
| % Identity | 16% | Template | c3pthA_ |
| PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:polyadenylate-binding protein 1; |
PDBTitle: the pabc1 mlle domain bound to the variant pam2 motif of larp4b
|
| Resolution | 1.70 Å |
|
| | |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
S | S | G | A | I | M | R | L | V | G | K | G | G | I | E | A | I | S | R | L | M | G | F | L | L |
| Query Conservation | |
|
| | |
| | | |
|
| | |
| | |
|
| |
|
| |
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
| |
| | | | |
| | |
| |
|
|
|
|
|
|
|
| Template Sequence | |
L | G | E | R | L | F | P | L | I | Q | A | M | H | P | T | L | A | G | K | I | T | G | M | L | L |
| Template Known Secondary structure | |
| | | | | | | | | | T | T |
| T | T | T | | | | | | | | | T |
| Template Predicted Secondary structure | |
| | | | | | | | | | | |
| | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
562 | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
