Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEY1
Confidence18.34%DateThu Jan 5 11:24:35 GMT 2012
Rank4Aligned Residues86
% Identity6%Templatec2vv5D_
PDB info PDB header:membrane proteinChain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 







Query SS confidence 















































































Query Sequence  KAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQSLMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVA
Query Conservation     
  
  

 



 
 




 

       
  

  
   
  


 
   
  

  




 









 
Alig confidence 















































































Template Conservation       
     
          
                       
          
  
   
     

   
    
Template Sequence  SYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGL
Template Known Secondary structure  GGGS
S
TTT

STT
Template Predicted Secondary structure 






Template SS confidence 















































































   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   86...90.
Predicted Secondary structure 
Query SS confidence 





Query Sequence  FIGFRM
Query Conservation   


 
Alig confidence 





Template Conservation   

 
 
Template Sequence  VVGLAL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   106...110.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions