Job Description P0AEY1 Confidence 1.41% Date Thu Jan 5 11:24:35 GMT 2012 Rank 47 Aligned Residues 104 % Identity 15% Template c2jlnA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:mhp1; PDBTitle: structure of mhp1, a nucleobase-cation-symport-1 family2 transporter Resolution 2.85 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.
Query Sequence		D	L	F	K	A	I	G	L	G	L	V	V	L	L	P	L	A	N	P	L	T	T	V	A	L	F	L	G	L	A	G	N	M	N	S	A	E	R	N	R	Q	S	L	M	.	.	.	.	.	.	.	.	.	A	S	V	Y	V	F	A	I	M	M	V	A	Y	Y	A	G	Q	L	V	M	D	T	F	G	I	S	I
Query Conservation																																														.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		G	V	L	N	T	F	L	N	L	L	A	S	A	L	G	P	L	A	G	I	M	I	S	D	Y	F	L	V	R	R	R	R	I	S	L	H	D	L	Y	R	T	K	G	I	Y	T	Y	W	R	G	V	N	W	V	A	L	A	V	Y	A	V	A	L	A	V	S	F	L	T	P	D	L	M	F	V	T	G	.	.	.
Template Known Secondary structure														T	T													T	T	S	T	T								T	B	S	S	S	T	T		T	B	T	T	B																	T		G	G	G						.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	L	R	I	A	G	G	L	I	V	A	F	I	G	F	R	M	L	F	P	Q	Q	K	A	I	D	S	P	E	A	K	S	K	S	E	E	L	E	D	E	P	S	A	N	I
Query Conservation
Alig confidence		.	.	.	.																	.	.	.	.	.	.
Template Conservation		.	.	.	.																	.	.	.	.	.	.
Template Sequence		.	.	.	.	L	I	A	A	L	L	L	H	I	P	A	M	R	W	V	A	.	.	.	.	.	.	K	T	F	P	L	F	S	E	A	E	S	R	N	E	D	Y	L	R	P	I
Template Known Secondary structure		.	.	.	.																T	.	.	.	.	.	.	T	T	S		S			G	G	G	G	G						S
Template Predicted Secondary structure		.	.	.	.																	.	.	.	.	.	.
Template SS confidence
						434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.							450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions