Job Description P64602 Confidence 99.70% Date Thu Jan 5 12:09:50 GMT 2012 Rank 4 Aligned Residues 96 % Identity 17% Template c3f43A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative anti-sigma factor antagonist tm1081; PDBTitle: crystal structure of a putative anti-sigma factor antagonist (tm1081)2 from thermotoga maritima at 1.59 a resolution Resolution 1.59 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		M	S	E	S	L	S	W	M	Q	T	G	D	T	L	A	L	S	G	E	L	D	Q	D	V	L	L	P	L	W	E	M	R	E	E	A	V	.	.	.	.	K	G	I	T	C	I	D	L	S	R	V	S	R	V	D	T	G	G	L	A	L	L	L	H	L	I	D	L	A	K	K	Q	G	N	N	V	T	L	Q	G
Query Conservation																																						.	.	.	.
Alig confidence																																						.	.	.	.
Template Conservation
Template Sequence		H	X	F	P	Y	K	I	V	D	D	V	V	I	L	X	P	N	K	E	L	N	I	E	N	A	H	L	F	K	K	W	V	F	D	E	F	L	N	K	G	Y	N	K	I	F	L	V	L	S	D	V	E	S	I	D	S	F	S	L	G	V	I	V	N	I	L	K	S	I	S	S	S	G	G	F	F	A	L	V	S
Template Known Secondary structure		T	S	S						T	T								S			S	T	T	T												T	G	G	G	T									T	T																							T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		V	N	D	K	V	Y	T	L	A	K	L	Y	N	L	P	A	.	.	D	V	L	P
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		P	N	E	K	V	E	R	V	L	S	L	T	N	L	D	R	I	V	K	I	Y	D
Template Known Secondary structure													T	T	G	G	G	T	S				S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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