Job Description P64602 Confidence 1.50% Date Thu Jan 5 12:09:50 GMT 2012 Rank 87 Aligned Residues 48 % Identity 6% Template c1oizA_ PDB info PDB header:transport Chain: A: PDB Molecule:alpha-tocopherol transfer protein; PDBTitle: the molecular basis of vitamin e retention: structure of2 human alpha-tocopherol transfer protein Resolution 1.88 Å

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		40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																					.	.	.	.
Query SS confidence												.	.																					.	.	.	.
Query Sequence		T	C	I	D	L	S	R	V	S	R	.	.	V	D	T	G	G	L	A	L	L	L	H	L	I	D	L	A	K	K	Q	G	.	.	.	.	N	N	V	T	L	Q	G	V	N	D	K	V	Y	T	L	A	K	L
Query Conservation												.	.																					.	.	.	.
Alig confidence												.	.																					.	.	.	.
Template Conservation
Template Sequence		A	I	F	D	L	E	G	W	Q	F	S	H	A	F	Q	I	T	P	S	V	A	K	K	I	A	A	V	L	T	D	S	F	P	L	K	V	R	G	I	H	L	I	N	E	P	V	I	F	H	A	V	F	S	M
Template Known Secondary structure							T	T							T	T															T	S	S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions