Job Description P0AFE0 Confidence 4.07% Date Thu Jan 5 11:26:01 GMT 2012 Rank 22 Aligned Residues 93 % Identity 9% Template d2j8cl1 SCOP info Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Resolution 1.87

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.
Predicted Secondary structure																																																							.	.	.												.	.	.	.	.	.
Query SS confidence																																																							.	.	.												.	.	.	.	.	.
Query Sequence		E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	.	.	.	Y	V	L	A	V	E	L	A	S	M	L	.	.	.	.	.	.	L	L	A	G	L	V	V
Query Conservation																																																							.	.	.												.	.	.	.	.	.
Alig confidence																																																							.	.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	G	Y	H	I	P	F	A	F	A	F	A	I	L	A	Y	L	T	L	V	L	F	R	P	V	M	M	G	A	W	G	Y	A	F	P	Y	G	I	W	T	H	L	D	W	V	S	N	T	G	Y	T	Y	G	N	F	H	Y	N	P	A	H	M	I	A	I	S	F	F	F	T	N	A	L	A	L	A	L	H	G
Template Known Secondary structure		T			S																		T							T		G	G	G	S					T	T													T	S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	H	V	G	R	E	E	R	A	G	E	V	L	S	N	R	K	D	D	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	V	L	S	A	A	N	P	E	K	G	K	E	M	R	T	P	D	H	E	D
Template Known Secondary structure									S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions