Job Description P0AFE0 Confidence 3.87% Date Thu Jan 5 11:26:01 GMT 2012 Rank 26 Aligned Residues 99 % Identity 10% Template d2i5nm1 SCOP info Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Resolution 1.96

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.
Predicted Secondary structure																																																							.	.	.												.	.	.	.	.	.
Query SS confidence																																																							.	.	.												.	.	.	.	.	.
Query Sequence		E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	.	.	.	Y	V	L	A	V	E	L	A	S	M	L	.	.	.	.	.	.	L	L	A	G	L	V	V
Query Conservation																																																							.	.	.												.	.	.	.	.	.
Alig confidence																																																							.	.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	G	T	H	I	A	W	N	F	A	A	A	I	F	F	V	L	C	I	G	C	I	H	P	T	L	V	G	S	W	S	E	G	V	P	F	G	I	W	P	H	I	D	W	L	T	A	F	S	I	R	Y	G	N	F	Y	Y	C	P	W	H	G	F	S	I	G	F	A	Y	G	C	G	L	L	F	A	A	H	G
Template Known Secondary structure		T			S																		T							T		G	G	G	S			B	S															T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	H	V	G	R	E	E	R	A	G	E	V	L	S	N	R	K	D	D	S	A	K	R	K	T	E	E	H	A
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		A	T	I	L	A	V	A	R	F	G	G	D	R	E	I	E	Q	I	T	D	R	G	T	.	.	A	V	E	R	A
Template Known Secondary structure							T	G	G	G	T	T	T								S				.	.
Template Predicted Secondary structure																									.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions