Job Description P0AFE0 Confidence 1.77% Date Thu Jan 5 11:26:01 GMT 2012 Rank 73 Aligned Residues 171 % Identity 13% Template d1rh5a_ SCOP info Preprotein translocase SecY subunit Preprotein translocase SecY subunit Preprotein translocase SecY subunit Resolution 3.20

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		I	L	A	T	L	R	V	I	T	H	T	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	.	.
Query Conservation																																																																																.	.
Alig confidence																																																																																.	.
Template Conservation
Template Sequence		I	G	S	G	I	G	L	F	I	A	A	G	V	S	Q	T	I	F	V	G	A	L	G	P	E	G	Y	L	W	K	F	L	N	S	L	I	Q	G	V	P	N	I	E	Y	I	A	P	I	I	G	T	I	I	V	F	L	M	V	V	Y	A	E	C	M	R	V	E	I	P	L	A	H	G	R	I	K	G	A	V	G
Template Known Secondary structure		S	S																					S	T	T										T	T	T	T				G	G	G	T																	T	T										S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
														91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	.	.	.	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Template Conservation
Template Sequence		K	Y	P	I	K	F	V	Y	V	S	N	I	P	V	I	L	A	A	A	L	F	A	N	I	Q	L	W	G	L	A	L	Y	R	M	G	I	P	I	L	G	H	Y	E	G	G	R	A	V	D	G	I	A	Y	Y	L	S	T	P	Y	G	L	S	S	V	I	S	D	P	I	H	A	I	V	Y	M	I	A	M	I	I
Template Known Secondary structure							S		T	T		S																						T	T	S			T	T			B		S	S	S	B	S	S	S	T	T	G	G	G					S	S	S				S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	V	G	R	E	E	R	A	G	E	V	L	S	N	R	K	D	D	S	A	K	R	K	T	E	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	C	V	M	F	G	I	F	W	V	E	T	T	G	L	D	P	K	S	M	A	K	R	I	S	E	K	A
Template Known Secondary structure															T		S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions