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Job Description | P77304 | Confidence | 1.62% | Date | Thu Jan 5 12:27:31 GMT 2012 |
Rank | 78 | Aligned Residues | 87 |
% Identity | 9% | Template | c3aq0G_ |
PDB info |
PDB header:transferase | Chain: G: PDB Molecule:geranyl diphosphate synthase; |
PDBTitle: ligand-bound form of arabidopsis medium/long-chain length prenyl2 pyrophosphate synthase (surface polar residue mutant)
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Resolution | 2.65 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
L | Q | G | I | M | A | V | Y | L | V | K | Q | L | G | M | S | E | A | D | . |
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S | I | T | L | F | S | S | F | S | A | L | V | Y | G | L | V | A | I | G | G | W | L | G | D | K | V | L | G | T | K | R | V | I | M | L | G | A | I | V | L | A | I | G | Y | A | L | V | A | W | S | G | H | D | A | G | I | V | Y | M |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | R | S | T | I | L | L | L | M | A | T | A | L | D | V | T | S | E | L | R | V | R | Q | R | G | I | A | E | I | T | E | M | I | H | V | A | S | L | L | H | D | D | V | L | V | V | M | . |
G | N | K | M | S | V | L | A | G | D | F | L | L | S | R | A | C | G | A | L | A | A | L | K | N | T | E | V | V | A | L | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
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118 | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | M | A | A | I | A | V | G | N | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | T | A | V | E | H | L | V | T | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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159 | 160 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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