Job Description P18196 Confidence 6.98% Date Thu Jan 5 11:36:43 GMT 2012 Rank 98 Aligned Residues 46 % Identity 9% Template c3mkqA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:coatomer beta'-subunit; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	P	Q	C	D	L	I	V	T	S	H	V	S	A	G	A	E	L	I	A	D	G	N	I	H	V	Y	G	M	M	R	G	R	A	L	A	G	A	S	G	D	R	E	T	Q	I	F	C	T	N	L	M	A	E
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.																											.
Template Conservation													.	.	.	.	.	.	.	.																											.
Template Sequence		F	H	P	T	E	P	W	V	L	T	T	.	.	.	.	.	.	.	.	L	Y	S	G	R	V	E	I	W	N	Y	E	T	Q	V	E	V	R	S	I	Q	V	T	E	T	P	.	V	R	A	G	K	F	I	A	R
Template Known Secondary structure				S	S	S	S						.	.	.	.	.	.	.	.		T	T	S							T	T	T	T										S	S		.								G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																											.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions