Job Description P18196 Confidence 82.24% Date Thu Jan 5 11:36:43 GMT 2012 Rank 9 Aligned Residues 128 % Identity 25% Template c3juxA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the translocation atpase seca from thermotoga2 maritima Resolution 3.10 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	P	K	V	I	H	Q	A	L	E	D	K	I	A	Q	A	P	A	F	L	K	H	A	P	V	V	L	N	V	S	A	L	E	D	P	V	N	W	S	A	M	H	K	A	V	S	A	T	G	L	R	V	I	G	V	S	G	C	K	D	A	Q	L	K	A	E	I	E	K	M	G	L	P	I	L	T	E	G	K
Query Conservation
Alig confidence																					.	.											.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation																					.	.											.	.	.																																							.	.	.	.	.	.	.	.
Template Sequence		R	T	Q	K	E	K	Y	E	K	I	V	E	E	I	E	K	R	Y	K	.	.	K	G	Q	P	V	L	V	G	T	T	.	.	.	S	I	E	K	S	E	L	L	S	S	M	L	K	K	K	G	I	P	H	Q	V	L	N	A	K	Y	H	E	K	E	A	E	I	V	A	K	A	G	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S																		.	.		T								S	.	.	.	S													T	T	T								S															.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.											.	.	.																																							.	.	.	.	.	.	.	.
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.			.	.	.	.	.	.	.	480	.	.				.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																								.	.	.	.	.																															.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.																															.	.	.	.	.	.	.
Query Sequence		E	K	A	P	R	P	A	P	T	P	Q	A	P	A	Q	N	T	T	P	V	T	K	T	R	L	I	D	T	P	V	R	S	G	Q	R	I	Y	A	.	.	.	.	.	P	Q	C	D	L	I	V	T	S	H	V	S	A	G	A	E	L	I	A	D	G	N	I	H	V	Y	G	M	M	R	.	.	.	.	.	.	.
Query Conservation																																								.	.	.	.	.																															.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.													.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	G	M	V	T	I	A	T	N	M	A	G	R	G	T	D	I	K	L	G	P	G	V	A	.	.	.	.	.	.	E	L	G	G	L	C	I	I	G	T	E	R	H	E	S	R	R	I	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T							T	T	T	T	T	T							T	T	T	T	.	.	.	.	.	.	T	T	T	S						S	S			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
																																521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.							.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
				171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	R	A	L	A	G	A	S	G	D	R	E	T	Q	I	F	C	T	N	L	M	A	E	L	V	S	I	A	G
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		N	Q	L	R	G	R	A	G	R	Q	G	D	P	G	E	S	I	F	F	L	S	L	E	D	D	L	L	R	I	F	G
Template Known Secondary structure						T	T	S	S		S	S											T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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