Return to main results Retrieve Phyre Job Id

Job DescriptionP18196
Confidence6.94%DateThu Jan 5 11:36:43 GMT 2012
Rank100Aligned Residues88
% Identity11%Templatec3e1yG_
PDB info PDB header:translationChain: G: PDB Molecule:eukaryotic peptide chain release factor gtp-binding subunit PDBTitle: crystal structure of human erf1/erf3 complex
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140.........150.........160.........170.........180.........190.........200..
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  TKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYW
Query Conservation    
 

   




 
    









 





 


 
 
 


 
 

  

  
 
 
  
 



 


 
 
Alig confidence 













.
.

.















...















....




















Template Conservation 
 



 
 
 

 .
.  .

 
 
 
      

...

      
  
 

 .... 
 
 
       
 

 

 
Template Sequence  DMGTVVLGKLESGS. I. CK. GQQLVMMPNKHNVEVL. . . GILSDDVETDTVAPGE. . . . NLKIRLKGIEEEEILPGFILC
Template Known Secondary structure  SSS

BS
..T.T

TTT

...B
BSSS
BS
TT
....SS
S


TT
Template Predicted Secondary structure 


..

.





...




....







Template SS confidence 















































































   450.........460... . .. ...470.........480.. .......490........ .500.........510.........
 
   203......210.........220
Predicted Secondary structure 











Query SS confidence 

















Query Sequence  LSDQIPAEFYGKAARLQL
Query Conservation    

        
  
 
Alig confidence 

















Template Conservation             
 
    
Template Sequence  DPNNLCHSGRTFDAQIVI
Template Known Secondary structure 
SSS

Template Predicted Secondary structure 







Template SS confidence 

















   520.........530.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions