Job Description P18196 Confidence 84.06% Date Thu Jan 5 11:36:43 GMT 2012 Rank 7 Aligned Residues 134 % Identity 22% Template c3dl8B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca Resolution 7.50 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	L	S	V	V	H	L	H	E	A	E	P	K	V	I	H	Q	A	L	E	D	K	I	A	Q	A	P	A	F	L	K	H	A	P	V	V	L	N	V	S	A	L	E	D	P	V	N	W	S	A	M	H	K	A	V	S	A	T	G	L	R	V	I	G	V	S	G	C	K	D	A	Q	L	K	A	E	I	E	K
Query Conservation
Alig confidence																											.	.	.	.	.	.											.	.	.
Template Conservation																											.	.	.	.	.	.											.	.	.
Template Sequence		R	P	D	L	I	Y	R	T	M	E	G	K	F	K	A	V	A	E	D	V	A	Q	R	Y	M	.	.	.	.	.	.	T	G	Q	P	V	L	V	G	T	V	.	.	.	A	V	E	T	S	E	L	I	S	K	L	L	K	N	K	G	I	P	H	Q	V	L	N	A	K	N	H	E	R	E	A	Q	I	I	E	E
Template Known Secondary structure									S	S	T																.	.	.	.	.	.		T								S	.	.	.	S															T							S	S	S
Template Predicted Secondary structure																											.	.	.	.	.	.											.	.	.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.							.	.	430	.	.	.	.	.	.	.				.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		M	G	L	P	I	L	T	E	G	K	E	K	A	P	R	P	A	P	T	P	Q	A	P	A	Q	N	T	T	P	V	T	K	T	R	L	I	D	T	P	V	R	S	G	Q	R	I	Y	A	.	.	.	.	.	P	Q	C	D	L	I	V	T	S	H	V	S	A	G	A	E	L	I	A	D	G	N	I	H	V	Y	G
Query Conservation																																																		.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.								.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Sequence		A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	G	A	V	T	I	A	T	N	M	A	G	R	G	T	D	I	K	L	.	.	.	.	.	.	G	E	G	V	K	E	L	G	G	L	A	V	V	G
Template Known Secondary structure		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S							T	T	T	S	S							.	.	.	.	.	.		S	S	G	G	G	S	S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template SS confidence
		474	.																																							.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.							.	.	.	.	500	.	.	.	.	.	.	.	.	.
		168	.	170										.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.
Query Sequence		M	M	R	.	.	.	.	.	.	.	.	.	G	R	A	L	A	G	A	S	G	D	R	E	T	Q	I	F	C	T	N	L	M	A	E	L	V	S	I	A	G
Query Conservation					.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	R	H	E	S	R	R	I	D	N	Q	L	R	G	R	S	G	R	Q	G	D	P	G	I	T	Q	F	Y	L	S	M	E	D	E	L	M	R	R	F	G
Template Known Secondary structure		S	S			S	S										T	S		S	S	S											T	T	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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