Job Description P18196 Confidence 86.71% Date Thu Jan 5 11:36:43 GMT 2012 Rank 6 Aligned Residues 132 % Identity 27% Template c1nl3B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:preprotein translocase seca 1 subunit; PDBTitle: crystal structure of the seca protein translocation atpase2 from mycobacterium tuberculosis in apo form Resolution 2.80 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	P	K	V	I	H	Q	A	L	E	D	K	I	A	Q	A	P	A	F	L	K	H	A	P	V	V	L	N	V	S	A	L	E	D	P	V	N	W	S	A	M	H	K	A	V	S	A	T	G	L	R	V	I	G	V	S	G	C	K	D	A	Q	L	K	A	E	I	E	K	M	G	L	P	I	L	T	E	G	K
Query Conservation
Alig confidence																					.	.											.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation																					.	.											.	.	.																																							.	.	.	.	.	.	.	.
Template Sequence		K	T	E	E	A	K	Y	I	A	V	V	D	D	V	A	E	R	Y	A	.	.	K	G	Q	P	V	L	I	G	T	T	.	.	.	S	V	E	R	S	E	Y	L	S	R	Q	F	T	K	R	R	I	P	H	N	V	L	N	A	K	Y	H	E	Q	E	A	T	I	I	A	V	A	G	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S																		.	.		T								S	.	.	.														T	T	T								S	S	S										T	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.											.	.	.																																							.	.	.	.	.	.	.	.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.				.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																								.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	A	P	R	P	A	P	T	P	Q	A	P	A	Q	N	T	T	P	V	T	K	T	R	L	I	D	T	P	V	R	S	G	Q	R	I	Y	A	.	.	.	.	.	P	Q	C	D	L	I	V	T	S	H	V	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																								.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	G	G	V	T	V	A	T	N	M	A	G	R	G	T	D	I	V	L	G	G	N	V	D	F	L	T	D	Q	R	L	R	E	R	G	L	D	P	V	E	T	P	E	E	Y	E	A	A	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T							T	T		S	T	T	S				T	T														T	T			T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
																154	.	.	.	.	.	160	.	.	.	.	.	.	.	.												.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	L	I	A	D	G	N	I	H	V	Y	G	M	.	.	.	.	.	.	.	.	.	.	.	M	R	G	R	A	L	A	G	A	S	G	D	R	E	T	Q	I	F	C	T	N	L	M	A	E	L	V	S	I	A	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation																																														.	.
Template Sequence		H	S	E	L	P	I	V	K	E	E	A	S	K	E	A	K	E	V	I	E	A	G	G	L	Y	V	L	G	T	E	R	H	E	S	R	R	I	D	N	Q	L	R	G	R	.	.	S	G	R	Q	G	D	P	G	E	S	R	F	Y	L	S	L	G	D	E	L	M	R	R	F	N
Template Known Secondary structure																						T	T	S						S	S			S	S									T	T	.	.	S	S	G	G	G											T	T	S					T	T	T
Template Predicted Secondary structure																																														.	.
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570			.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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