Job Description P77672 Confidence 96.80% Date Wed Jan 25 15:21:11 GMT 2012 Rank 2 Aligned Residues 287 % Identity 16% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	F	I	Q	N	N	R	E	I	T	A	L	L	A	V	V	L	L	F	V	L	P	G	F	L	D	R	Q	Y	L	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	L	T	M	V	Y	S	S	A	Q	I	L	I	L	L	A	M	G	A	T	L	V	M	L	T	R	N
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	R	Q	Q	Q	R	Q	N	I	R	W	L	L	C	L	S	V	L	X	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q	A	L	F	E	N
Template Known Secondary structure																															B	S	S	S	B			S	G	G	G	S	S	T	T	T	T	T					T																											T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
							63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																									.	.
Query SS confidence		.	.	.	.	.																																																									.	.
Query Sequence		.	.	.	.	.	I	D	V	S	V	G	S	I	T	G	M	C	A	V	L	L	G	M	L	L	N	A	G	Y	S	L	P	V	A	C	V	A	T	L	L	L	G	L	L	A	G	F	F	N	G	V	L	V	A	W	L	K	I	P	A	I	.	.	V	A	T	L	G	T	L	G	L	Y	R	G	I	M	L	L	W
Query Conservation		.	.	.	.	.																																																									.	.
Alig confidence		.	.	.	.	.																																																									.	.
Template Conservation
Template Sequence		P	L	A	E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	X	T	W	A
Template Known Secondary structure		T	T			T	T	T	T	T															T	S		T	T																												T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	G	K	W	I	E	G	L	P	A	E	L	K	Q	L	S	A	P	L	L	L	G	V	S	A	I	G	W	L	T	I	I	L	V	A	F	M	A	W	L	L	A	K	T	A	F	G	R	S	F	Y	A	T	G	D	N	L	Q	G	A	R	Q	L	G	V	R	T	E	A	I	R	I	V	A	F	S	L	N	G
Query Conservation
Alig confidence																																																	.	.	.
Template Conservation																																																	.	.	.
Template Sequence		I	Y	F	S	T	S	V	D	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A	L	I	P	V	L	L	W	I	C	C	Q	S	R	P	.	.	.	X	N	X	L	A	L	G	E	I	S	A	R	Q	L	G	L	P	L	W	F	W	R	N	V	L	V	A	A	T	G
Template Known Secondary structure																		T				T	T			G	G	G																					.	.	.														T	T
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		216	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.						.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.										.	.	.	.	.
Query SS confidence													.	.										.	.	.	.	.
Query Sequence		C	M	A	A	L	A	G	I	V	F	A	.	.	S	Q	I	G	F	I	P	N	Q	.	.	.	.	.	T	G	T	G	L	E	M	K	A	I	A	A	C	V	L	G	G	I	S	L	L	G	G	S	G	A	I	I	G	A	V	L	G	A	W	F	L	T	Q	I	D	S	V	L	V	L	L	R	I	P	A	W	W
Query Conservation													.	.										.	.	.	.	.
Alig confidence													.	.										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	X	V	G	V	S	V	A	L	A	G	A	I	G	F	I	G	L	V	I	P	H	I	L	R	L	C	G	L	T	D	H	R	V	L	L	P	G	C	A	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	A	L	L	L	A	D	I	V	A	R	L	A	L	A	A	A	E	L	P	I	G	V
Template Known Secondary structure																S	S	S	S									T	T			S													.	.	.	.	.	.	.	.	.	.	.	.	.														S		S	S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.														.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	F	I	A	G	L	V	L	L	A	V	L	V	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	A	T	L	G	A	P	V	F	I	W	L	L	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions