 |
Job Description | P76214 | Confidence | 55.85% | Date | Wed Jan 25 15:21:06 GMT 2012 |
Rank | 26 | Aligned Residues | 94 |
% Identity | 18% | Template | d2phla2 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 2.20 |
|
 |
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
. | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . |
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | N | A | A | G | E | T | R | E | I | C | T | F | P | P | A | K | R | D | F | Y | W | R | A | S | I | A | S | I | A | A | N | G | E | F | S | L | . |
F | . |
P | G | M | E | R | I | V | T | L | L | E | G | G | E | M | L | L | E | S | A | . |
. |
. |
. |
. |
. |
. |
. |
D | R | F | N | H | T | L | K | P | F | Q | P |
Query Conservation |   |
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|   |
|   |
|   |   |   |
|   |
|
|   | . |
| . |
|
|
|
|
|   |
|   |   |
|   |
|   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |
|   |
|
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
Template Sequence |   |
G | N | E | F | G | N | L | T | E | R | T | . |
. |
. |
. |
. |
D | N | S | L | N | V | L | I | S | S | I | E | M | E | E | G | A | L | F | V | P | H | Y | Y | S | K | A | I | V | I | L | V | V | N | E | G | E | A | H | V | E | L | V | G | P | K | G | E | T | L | E | Y | E | S | Y | R | A | E | L | S | K | D | D | V |
Template Known Secondary structure |   |
 |  | T | T |  |  |  |  |  |  |  | . | . | . | . | . |  | T | T | T | T |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |
|
|
|
| S |
|  |  |  |  |  |  |  |  |  | T | T |
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | A | F | A | A | D | Q | V | V | K | A | K | L | T | A | G | Q | M | S | M | D | F | N | I | M | T | R | L | D |
Query Conservation |   |
  |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |
Template Sequence |   |
F | V | I | P | A | A | Y | P | V | A | I | K | A | T | S | N | V | N | F | T | G | F | G | I | N | A | N | N | N |
Template Known Secondary structure |   |
 |  |  |
| T | T |
|
|  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  | S |
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|