Job Description P76214 Confidence 91.83% Date Wed Jan 25 15:21:06 GMT 2012 Rank 8 Aligned Residues 169 % Identity 14% Template c3rnsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis Resolution 2.07 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		M	E	Y	F	D	M	R	K	M	S	V	N	L	W	R	N	A	A	G	E	T	R	E	I	C	T	F	P	P	A	K	R	D	F	Y	W	R	A	S	I	A	S	I	A	A	N	G	E	F	.	S	L	F	P	G	M	E	R	I	V	T	L	L	E	G	G	E	M	L	L	E	S	A	D	R	F	N	H	T	L
Query Conservation																																																			.
Alig confidence												.	.																		.	.	.	.	.	.															.																	.												.
Template Conservation												.	.																		.	.	.	.	.	.																																.												.
Template Sequence		A	K	P	I	N	F	N	R	L	I	.	.	T	S	K	E	A	E	V	V	S	X	R	I	L	N	Q	P	N	.	.	.	.	.	.	S	Y	I	S	L	F	S	L	A	K	D	E	E	I	T	A	E	A	X	L	G	N	R	Y	Y	Y	C	F	N	G	N	.	G	E	I	F	I	E	N	N	K	K	T	.	I
Template Known Secondary structure		S	S									.	.				T	T											S	S	.	.	.	.	.	.										T	T							S		S	S									S		.						S	S					.
Template Predicted Secondary structure												.	.																		.	.	.	.	.	.																																.												.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.		.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		K	P	F	Q	P	F	A	F	A	A	D	Q	V	V	K	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	A	G	Q	M	S	M	D	F	N	I	M	T	R	L	D	V	C	K	A	K	V	R	I	A	E	R	T	F	T	T	F	.	.	G	S	R	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																										.	.
Template Conservation																																																		.
Template Sequence		S	N	G	D	F	L	E	I	T	A	N	H	N	Y	S	I	E	A	R	D	N	L	K	L	I	E	I	G	E	K	I	S	A	F	N	L	A	E	V	V	E	Y	Q	E	G	K	I	V	.	S	K	N	L	V	A	K	P	N	L	V	X	T	I	X	S	F	W	K	G	E	S	L	D	P	H	K	A	P	G	D
Template Known Secondary structure			T	T							S	S								S	S	S															S	G	G	G	S				T	T				.								T	T										T	T									S	S
Template Predicted Secondary structure																																																		.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure														.	.															.	.	.
Query SS confidence														.	.															.	.	.
Query Sequence		G	V	V	F	V	I	N	G	A	W	Q	L	.	.	G	D	K	L	L	T	T	D	Q	G	A	C	W	F	.	.	.	D	G	R	H	T	L	R	L	L	Q	P	Q	G	K	L	L	F	S	E	I	N
Query Conservation														.	.															.	.	.
Alig confidence														.	.															.	.	.
Template Conservation
Template Sequence		A	L	V	T	V	L	D	G	E	G	K	Y	Y	V	D	G	K	P	F	I	V	K	K	G	E	S	A	V	L	P	A	N	I	P	H	A	V	E	A	E	T	E	N	F	K	X	L	L	I	L	V	K
Template Known Secondary structure																T	T							T	T							T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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