Job Description P76214 Confidence 53.44% Date Wed Jan 25 15:21:06 GMT 2012 Rank 28 Aligned Residues 107 % Identity 16% Template c3ibmB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																				.															.	.	.
Query SS confidence																				.															.	.	.
Query Sequence		E	Y	F	D	M	R	K	M	S	V	N	L	W	R	N	A	A	G	.	E	T	R	E	I	C	T	F	P	P	A	K	R	D	.	.	.	F	Y	W	R	A	S	I	A	S	I	A	A	N	G	E	F	S	L	F	P	G	M	E	R	I	V	T	L	L	E	G	G	E	M	L	L	E	S	A	D	R	F	N	H
Query Conservation																				.															.	.	.
Alig confidence											.	.	.							.															.	.	.																								.									.
Template Conservation											.	.	.																																																.									.
Template Sequence		R	V	L	R	E	R	D	Y	R	.	.	.	W	E	G	T	E	E	E	A	R	R	Q	T	L	V	G	R	P	A	G	Q	E	A	P	A	F	E	T	R	Y	F	E	V	E	P	G	G	Y	T	T	L	E	R	H	E	H	T	H	.	V	V	M	V	V	R	G	H	.	A	E	V	V	L	D	D	R	V	E	P
Template Known Secondary structure								T	T		.	.	.		T	T												S	G	G	G	T			S		S										T	T		B				B	B		S	S			.							S		.						T	T
Template Predicted Secondary structure											.	.	.																																																.									.
Template SS confidence
		10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	P	F	Q	P	F	A	F	A	A	D	Q	V	V	K	A	K	L	T	A	G	Q	M	S	M	D	F	N	I	M	T	R	L	D	V
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	L	T	P	L	D	C	V	Y	I	A	P	H	A	W	H	Q	I	H	A	T	G	A	N	E	P	L	G	F	L	C	I	V	D	S	D	R
Template Known Secondary structure		.			T	T							T	T										S	S	S										S	S
Template Predicted Secondary structure		.
Template SS confidence
			96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions