 |
Job Description | P76214 | Confidence | 15.10% | Date | Wed Jan 25 15:21:06 GMT 2012 |
Rank | 52 | Aligned Residues | 98 |
% Identity | 14% | Template | c2vecA_ |
PDB info |
PDB header:cytosolic protein | Chain: A: PDB Molecule:pirin-like protein yhak; |
PDBTitle: the crystal structure of the protein yhak from escherichia2 coli
|
Resolution | 1.85 Å |
|
 |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 150 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . |
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | F | Q | P | F | A | F | A | A | D | Q | V | V | K | A | K | L | T | A | G | Q | M | S | M | D | F | N | I | M | T | R | L | D | V | C | K | A | K | V | R | I | A | E | R | T | F | T | T | F | G | S | R | G | G | V | V | F | V | I | N | G | A | W | Q | L | . |
. |
. |
. |
. |
G | D | K | L | L | T | T | D | Q |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |   | . | . | . | . | . |   |
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
Template Sequence |   |
P | L | I | Q | K | L | A | L | N | M | G | K | Q | Q | L | I | A | S | P | E | G | A | M | G | . |
S | L | Q | L | R | Q | Q | V | W | L | H | H | I | V | L | D | K | G | E | S | A | N | F | Q | L | H | G | P | R | A | Y | L | Q | S | I | H | G | K | F | H | A | L | T | H | H | E | E | K | A | A | L | T | C | G | D |
Template Known Secondary structure |   |
| S |  |  |  |  |  |
|
|
| S | S |  |  |  |  |  |  | S | S |
| G | G | G | . |
|  |  |
| S | S | S |
|  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  | T | T |  |  |  |  |  |  |
| T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | |
. | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
  |
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | C | W | F | D | G | R | H | T | L | R | L | L | Q | P | Q | G | K | L | L | F | S | E |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|
|
|
|
Template Sequence |   |
G | A | F | I | R | D | E | A | N | I | T | L | V | A | D | S | P | L | R | A | L | L | I | D |
Template Known Secondary structure |   |
 |  |  |  |  | S |
| S |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|