 |
Job Description | P0A858 | Confidence | 28.74% | Date | Thu Jan 5 11:06:58 GMT 2012 |
Rank | 207 | Aligned Residues | 64 |
% Identity | 19% | Template | d1v5xa_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 2.00 |
|
 |
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . |
|  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | G | K | S | A | T | P | A | Q | A | Q | A | V | H | K | F | I | R | D | H | I | A | K | V | D | A | N | I | A | E | Q | V | I | I | Q | Y | G | G | S | V | N | A | S | N | A | A | E | L | F | A | Q | P | D | I | D | G | A | L | V | . |
. |
. |
. |
. |
. |
. |
. |
G | G | A | S | L | K | A | D | A | F | A | V |
Query Conservation |   |
|
|
|   |   |
|
|   |
|   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|
| . | . | . | . | . | . | . | . |
|   |
|
|
|   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|
|
|
|   |
|   |
|
|   |   |   |   |   | . |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|   | . | . |
|
|   |   |
|
|   |   |
Template Sequence |   |
G | S | G | E | A | Y | P | R | A | W | A | K | P | L | L | A | T | G | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | V | I | L | A | G | G | I | A | P | E | N | L | E | E | V | L | A | . |
L | R | P | Y | A | L | D | L | A | S | G | V | E | E | A | P | G | V | . |
. |
K | S | A | E | K | L | R | A |
Template Known Secondary structure |   |
T | S |
|
|
|
|
| G | G | G | G |  |  |  |  |  | T | T | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
| S | S |
|
| S | T | T |  |  |  |  |  |  | . |  |
|
| S |  |  |  |  | S | G | G | G |  |  |  | T | T |  | . | . |  |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
. | . | . | . | . | . | 190 | . |
  |
  |   |
245 | . | . | . | . | 250 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | K | A | A | E | A | A | K |
Query Conservation |   |
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |
|   |
Template Sequence |   |
L | F | A | R | L | A | S | L | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
192 | . | . | . | . | . | . | . | 200 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|