Return to main results Retrieve Phyre Job Id

Job DescriptionP0A858
Confidence100.00%DateThu Jan 5 11:06:58 GMT 2012
Rank5Aligned Residues250
% Identity43%Templated1b9ba_
SCOP infoTIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM)
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  RHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAA
Query Conservation 

 

  




            
         
 
 
 

   
           
 





     

 





 
Alig confidence 















































































Template Conservation 

 

  




            
         
 
 


    
           
 





     

 





 
Template Sequence  RKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSGRNIKLGAQNVFYEDQGAFTGEISPL
Template Known Secondary structure 
S


S


TSS

SS

GGGTTSSSS


SSSSSS
TT


Template Predicted Secondary structure 




































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  MLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEG
Query Conservation 



 
   








  
 


  
  

  

  

 






   
         
  

   
  
       
Alig confidence 















































































Template Conservation 

 
 
   








  
 


  
  

  

  

 






    
        
  

   
  
       
Template Sequence  MLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKR
Template Known Secondary structure  TTT

S
TS


TT



T
TT

TT
Template Predicted Secondary structure 
























Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   162.......170.........180.........190......... 200.........210.........220.........230.........240
Predicted Secondary structure 









.
















Query SS confidence 





































.








































Query Sequence  AVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDA. NIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKAD
Query Conservation 













  

 
 
  
   

  
     .  
  
 






   
   
     


 


 


   
Alig confidence 





































.







































.
Template Conservation 













  

 
 
  
   

  
           
 






   
   
     


 


 


  .
Template Sequence  VVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPDNFLGLIVQKDIDGGLVGGASLKE.
Template Known Secondary structure 


GGGSSSS



S
SSS

TTTSSSTT

SGGGTST.
Template Predicted Secondary structure 





























.
Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240.
 
   241........250..
Predicted Secondary structure 
Query SS confidence 











Query Sequence  AFAVIVKAAEAA
Query Conservation   
  

  
   
Alig confidence 











Template Conservation   
  

     
Template Sequence  SFIELARIMRGV
Template Known Secondary structure  T
.
Template Predicted Secondary structure 

Template SS confidence 











   242.......250...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions