Job Description P0A858 Confidence 100.00% Date Thu Jan 5 11:06:58 GMT 2012 Rank 2 Aligned Residues 252 % Identity 66% Template d1aw1a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		R	H	P	L	V	M	G	N	W	K	L	N	G	S	R	H	M	V	H	E	L	V	S	N	L	R	K	E	L	A	G	V	A	G	C	A	V	A	I	A	P	P	E	M	Y	I	D	M	A	K	R	E	A	E	.	.	G	S	H	I	M	L	G	A	Q	N	V	D	L	N	L	S	G	A	F	T	G	E	T	S
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		R	H	P	V	V	M	G	N	W	K	L	N	G	S	K	E	M	V	V	D	L	L	N	G	L	N	A	E	L	E	G	V	T	G	V	D	V	A	V	A	P	P	A	L	F	V	D	L	A	E	R	T	L	T	E	A	G	S	A	I	I	L	G	A	Q	N	T	D	L	N	N	S	G	A	F	T	G	D	M	S
Template Known Secondary structure												S																		T	T	T			S	S								G	G	G												T								S				S		S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	L	K	D	I	G	A	Q	Y	I	I	I	G	H	S	E	R	R	T	Y	H	K	E	S	D	E	L	I	A	K	K	F	A	V	L	K	E	Q	G	L	T	P	V	L	C	I	G	E	T	E	A	E	N	E	A	G	K	T	E	E	V	C	A	R	Q	I	D	A	V	L	K	T	Q	G	A	A	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	M	L	K	E	F	G	A	T	H	I	I	I	G	H	S	E	R	R	E	Y	H	A	E	S	D	E	F	V	A	K	K	F	A	F	L	K	E	N	G	L	T	P	V	L	C	I	G	E	S	D	A	Q	N	E	A	G	E	T	M	A	V	C	A	R	Q	L	D	A	V	I	N	T	Q	G	V	E	A	L
Template Known Secondary structure						G	G	G	T							S								S																		T																T	T																			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	A	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	S	A	T	P	A	Q	A	Q	A	V	H	K	F	I	R	D	H	I	A	K	V	D	A	N	I	A	E	Q	V	I	I	Q	Y	G	G	S	V	N	A	S	N	A	A	E	L	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	S	L	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	A	I	I	A	Y	E	P	I	W	A	I	G	T	G	K	A	A	T	A	E	D	A	Q	R	I	H	A	Q	I	R	A	H	I	A	E	K	S	E	A	V	A	K	N	V	V	I	Q	Y	G	G	S	V	K	P	E	N	A	A	A	Y	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	A	L	D	A
Template Known Secondary structure		T	T								G	G	G	T	T	T	S																					T	T														S				T	T	T						T	S	T	T							S	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	A	V	I	V	K	A	A	E	A	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	F	A	A	I	A	K	A	A	A	E	A	K
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions