Job Description P0A858 Confidence 27.87% Date Thu Jan 5 11:06:58 GMT 2012 Rank 210 Aligned Residues 139 % Identity 14% Template c3noeA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from pseudomonas2 aeruginosa Resolution 2.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		80	.	.	.	.	.	.	.	.	.	90	.	.	.		.										.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.		.	.	.	.	.	.	.	.	.
Query SS confidence																.		.	.	.	.	.	.	.	.	.
Query Sequence		A	A	M	L	K	D	I	G	A	Q	Y	I	I	I	.	G	.	.	.	.	.	.	.	.	.	H	S	E	R	R	T	Y	H	K	E	S	D	E	L	I	A	K	K	F	A	V	L	K	E	Q	G	L	T	P	V	L	C	I	G	E	T	E	A	E	N	E	A	G	K	T	E	E	V	C	A	R	Q	I	D	A
Query Conservation																.		.	.	.	.	.	.	.	.	.
Alig confidence																.		.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		V	D	F	H	L	Q	D	G	T	N	A	I	V	A	V	G	T	T	G	E	S	A	T	L	D	V	E	E	H	I	Q	.	.	.	.	.	.	.	.	V	V	R	R	V	V	D	Q	V	K	G	R	I	P	V	I	A	G	T	G	A	N	.	.	.	.	.	.	.	.	S	T	R	E	A	V	A	L	T	E	A
Template Known Secondary structure									T		S					S	S	T	T	T	T	G	G	G									.	.	.	.	.	.	.	.										T	T	S	S									S	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.									.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80									.	.	.	.	.	.	.	.	.	90	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	K	T	Q	G	A	A	A	F	E	G	A	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	S	A	T	P	A	Q	A	Q	A	V	H	K	F	I	R	D	H	I	A	K	V	D	A	N	I	A	E	Q	V	I	I	Q	Y	G	G	S	V	N	A	S	N	A	A	E	L	F	A	Q	P	D	I	D	G
Query Conservation
Alig confidence			.	.	.	.	.																.	.	.	.	.																					.	.
Template Conservation			.	.	.	.	.																.	.	.	.	.																					.	.
Template Sequence		A	.	.	.	.	.	K	S	G	G	A	D	A	C	L	L	V	T	P	Y	Y	.	.	.	.	.	N	K	P	T	Q	E	G	M	Y	Q	H	F	R	H	I	A	E	A	V	A	.	.	I	P	Q	I	L	Y	N	V	P	G	R	T	S	C	D	M	L	P	E	T	V	E	R	L	S	K	V	P	N	I	I	G
Template Known Secondary structure			.	.	.	.	.		T	T	T		S									S	.	.	.	.	.	S																		S		.	.	S												S													T	S	T	T
Template Predicted Secondary structure			.	.	.	.	.																.	.	.	.	.																					.	.
Template SS confidence
		92						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	G	G	A	S	L	K	A	D	A	F	A	V	I	V	K	A
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		I	K	.	.	E	A	T	G	D	L	Q	R	A	K	E	V	I	E	R
Template Known Secondary structure				.	.			S
Template Predicted Secondary structure				.	.
Template SS confidence
		160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions