Job Description P0A858 Confidence 96.33% Date Thu Jan 5 11:06:58 GMT 2012 Rank 49 Aligned Residues 129 % Identity 17% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	L	K	D	I	G	A	Q	Y	I	I	I	G	H	S	E	R	R	T	Y	H	K	E	S	D	E	L	I	A	K	K	F	A	V	L	K	E	Q	G	L	T	P	V	L	C	I	G	E	T	E	A	E	N	E	A	G	K	T	E	E	V	C	A	R	Q	I	D	A	V	L	K	T	Q	G	A	A	A	F
Query Conservation
Alig confidence																			.	.	.	.										.	.	.	.																		.	.	.	.																						.	.	.	.
Template Conservation																			.	.	.	.										.	.	.	.																		.	.	.	.																						.	.	.	.
Template Sequence		Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	A	D	V	.	.	.	.	P	T	N	E	S	Q	P	F	V	.	.	.	.	A	A	A	E	K	F	G	I	Q	P	I	F	I	A	P	P	T	.	.	.	.	A	S	D	E	T	L	R	A	V	A	Q	L	G	K	G	Y	T	Y	L	L	S	.	.	.	.
Template Known Secondary structure									T							T	T	S	.	.	.	.		G	G	G						.	.	.	.						T	T									T	T	.	.	.	.			S												S							.	.	.	.
Template Predicted Secondary structure																			.	.	.	.										.	.	.	.																		.	.	.	.																						.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		E	G	A	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	S	A	T	P	A	Q	A	Q	A	V	H	K	F	I	R	D	H	I	A	K	V	D	A	N	I	A	E	Q	V	I	I	Q	Y	G	G	S	V	.	N	A	S	N	A	A	E	L	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	S	L	K
Query Conservation																																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.												.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	P	.	.	.	.	.	.	.	V	H	A	L	L	E	R	L	Q	Q	F	.	.	.	.	.	.	.	.	.	D	A	P	P	A	L	L	G	F	G	I	S	E	P	A	Q	V	K	Q	A	I	E	.	A	G	A	A	G	A	I	S	G	S	A	V	V	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.											T	.	.	.	.	.	.	.	.	.	T								S	S			S										.	T	T		S					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																							.
Template SS confidence
															179	180	.								.	.	.	.	.	.	.	.	190	.	.										.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.
														239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	F	A	V	I	V	K	A	A	E	A	A	K	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	E	T	H	L	D	N	P	A	K	Q	L	T	E	L	A	N	F	T	Q	A	M	K	K	A	T	K
Template Known Secondary structure						T	T	T																			T	T	B
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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