Job Description P0A858 Confidence 69.50% Date Thu Jan 5 11:06:58 GMT 2012 Rank 127 Aligned Residues 145 % Identity 14% Template c3l5aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.																							.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.
Predicted Secondary structure																	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																											.	.
Query SS confidence																	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																											.	.
Query Sequence		S	A	A	M	L	K	D	I	G	A	Q	Y	I	I	I	.	.	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	.	E	R	R	T	Y	H	K	E	S	D	E	L	I	A	K	K	F	A	V	L	K	E	Q	G	L	T	.	.	P	V	L	C	I	G	E	T	E
Query Conservation																	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.																											.	.
Alig confidence																	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.									.	.	.																.	.
Template Conservation																																																					.	.	.
Template Sequence		A	T	L	R	A	I	K	A	G	F	D	G	V	E	I	S	I	A	Q	R	L	L	I	Q	T	F	F	S	T	F	S	N	R	R	T	D	H	Y	G	A	D	S	L	K	N	R	A	R	L	C	L	.	.	.	E	V	X	R	A	V	Q	E	V	I	D	K	E	A	P	D	N	F	I	L	G	F	R	A	T	P
Template Known Secondary structure									T	T		S								T	T	S								T	T	T					S	T	T	S	T	T											.	.	.																T	T									S
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		132	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		A	E	N	E	A	.	.	.	G	K	T	E	E	V	C	A	R	Q	I	D	A	V	L	K	T	Q	G	A	A	A	F	E	G	A	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	S	A	T	P	A	Q	A	Q	A	V	H	K	F	I	R	D	H	I	A	K	V	D	A	N	I	A	E	Q	V	I	I	Q
Query Conservation							.	.	.
Alig confidence							.	.	.																																																								.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	T	R	G	S	D	L	G	Y	T	I	D	E	F	N	Q	L	I	D	W	V	X	D	V	S	N	I	Q	Y	L	A	I	A	S	W	G	R	H	I	Y	Q	N	T	S	R	T	P	G	D	H	F	G	R	P	V	N	Q	I	V	Y	E	H	.	.	.	.	.	.	.	.	.	L	A	G	R	I	P	L	I
Template Known Secondary structure						T	T																				S										T	T			G	G	G		B				S	S	T	T	T	T	S	B									.	.	.	.	.	.	.	.	.		T	T	S	S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.										.	.	.	.	.	300	.	.
		209	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		Y	G	G	S	V	.	N	A	S	N	A	A	E	L	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	S	L
Query Conservation							.
Alig confidence							.												.	.
Template Conservation																			.	.
Template Sequence		A	S	G	G	I	N	S	P	E	S	A	L	D	A	L	Q	H	.	.	A	D	X	V	G	X	S	S	P	F	V
Template Known Secondary structure				S	S			S								G	G	G	.	.		S					S	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions