Return to main results Retrieve Phyre Job Id

Job DescriptionP0A858
Confidence93.23%DateThu Jan 5 11:06:58 GMT 2012
Rank65Aligned Residues139
% Identity12%Templatec3exsB_
PDB info PDB header:lyaseChain: B: PDB Molecule:rmpd (hexulose-6-phosphate synthase); PDBTitle: crystal structure of kgpdc from streptococcus mutans in2 complex with d-r5p
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.........100.........110.........120.........130.........140.........150....
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  TGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQ
Query Conservation 





 



 
   








  
 


  
  

  

  

 






   
         
  

   
  
Alig confidence 


















.



......


























.......................
Template Conservation 
           


 


.
   ......                           .......................
Template Sequence  AGGTVAKNNAVRGADWMTC. ICSA. . . . . . TIPTMKAARKAIEDINPDKGEIQVELY. . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TTT
S.TTS......

TTT


.......................
Template Predicted Secondary structure 




.



......









.......................
Template SS confidence 















































































   70.........80........ .90.. .......100.........110.........
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  GAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGG
Query Conservation         













  

 
 
  
   

  
       
  
 






   
   
     


 


 
Alig confidence 






































........






















.








Template Conservation                
                
       ........     
 
 


           .


 




Template Sequence  GDWTYDQAQQWLDAGISQAIYHQSRTWGEKDLNKVKKLI. . . . . . . . EMGFRVSVTGGLSVDTLKLFEGV. DVFTFIAGR
Template Known Secondary structure  SS

TT







........T
SS

TTTGGGGTTS.

S
Template Predicted Secondary structure 












........








.




Template SS confidence 















































































   120.........130.........140.........150........ .160.........170.........180. ........190
 
   235....240.........250..
Predicted Secondary structure 

Query SS confidence 

















Query Sequence  ASLKADAFAVIVKAAEAA
Query Conservation 


    
  

  
   
Alig confidence 

















Template Conservation 

  
 

  

      
Template Sequence  GITEAKNPAGAARAFKDE
Template Known Secondary structure  SSSS
Template Predicted Secondary structure 



Template SS confidence 

















   198.200.........210.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions