Job Description P0A858 Confidence 93.72% Date Thu Jan 5 11:06:58 GMT 2012 Rank 59 Aligned Residues 219 % Identity 16% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		M	R	H	P	L	V	M	G	N	W	K	L	N	G	S	R	H	M	V	H	E	L	V	S	N	L	R	K	E	L	A	G	V	A	G	C	A	V	A	.	.	.	I	A	P	P	E	M	Y	I	D	M	A	K	R	E	A	E	G	S	H	I	M	L	G	A	Q	N	V	D	L	N	L	S	G	A	F	T	G	E
Query Conservation																																									.	.	.
Alig confidence													.																												.	.	.																	.						.	.	.												.	.
Template Conservation													.																																															.						.	.	.												.	.
Template Sequence		L	K	Q	Q	K	L	S	V	G	I	L	.	S	A	N	W	L	Q	L	N	E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	A	I	G	I	K	Y	F	P	.	T	H	C	F	K	.	.	.	D	V	H	L	X	V	R	N	Q	L	E	.	.
Template Known Secondary structure			T	T							G	G	.	G	S		G	G	G											T	T										B	S	S	S	S	S		B		B		T					T	S		.	T	T	S			.	.	.							S					.	.
Template Predicted Secondary structure													.																																															.						.	.	.												.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		T	S	A	A	M	L	K	D	I	G	A	Q	Y	I	I	I	G	H	S	E	R	R	T	Y	H	K	E	S	D	E	L	I	A	K	.	.	K	F	A	V	L	K	E	Q	G	L	T	P	V	L	C	I	G	E	T	E	A	E	N	E	A	G	K	T	E	E	V	C	A	R	Q	I	D	A	V	L	K	T	Q	G
Query Conservation																																				.	.
Alig confidence		.																.																		.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																.																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	V	A	K	A	V	V	A	N	G	A	N	L	V	T	L	.	Q	L	E	Q	Y	H	D	F	A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	C	P	E	T	P	I	S	E	.	.	.	.	.	.	.	.	.	.	.	L	E	P	Y	L	D	Q	I	D
Template Known Secondary structure		.								T	T		S					.		T	T		T	T	S									T	T						T	T													T	T	S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	G	T	T	T	T	T	T		S
Template Predicted Secondary structure		.																.																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			83	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140												.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		A	A	A	F	E	G	A	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	S	A	T	P	A	Q	A	Q	A	V	H	K	F	I	R	D	H	I	A	K	V	D	A	N	I	A	E	Q	V	I	I	Q	Y	G	G	S	V	N	A	S	N	A	A	E	L	F	A	Q	.	P	D	I	D	G	A	L	V	G	G
Query Conservation																																																																							.
Alig confidence		.	.	.	.										.	.	.	.																													.	.	.	.																					.
Template Conservation		.	.	.	.										.	.	.	.																													.	.	.	.
Template Sequence		.	.	.	.	V	I	Q	L	L	T	L	D	P	.	.	.	.	R	N	G	T	K	Y	P	S	E	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R	V	E	.	.	.	.	K	L	I	N	I	D	G	S	X	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S
Template Known Secondary structure		.	.	.	.						S			T	.	.	.	.	T	T	T																				G	G	G	G	G	G	.	.	.	.							S	S												S	S	S									G
Template Predicted Secondary structure		.	.	.	.										.	.	.	.																													.	.	.	.
Template SS confidence
						150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	K	A	D	A	F	A	V	I	V	K	A	A	E	A	A
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		A	L	F	S	.	G	E	L	K	T	N	L	K	V	W	K	S	S
Template Known Secondary structure		G	G	G	S	.	S
Template Predicted Secondary structure						.
Template SS confidence
		218	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions