Job Description P0A858 Confidence 23.47% Date Thu Jan 5 11:06:58 GMT 2012 Rank 228 Aligned Residues 41 % Identity 27% Template c3crqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel Resolution 2.20 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.																.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		I	G	T	G	K	S	A	T	P	A	Q	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	H	K	F	I	R	D	H	I	A	K	V	D	A	.	N	I	A	E	Q	V	I	I	Q	Y	G	G	S
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		I	G	T	A	K	P	S	R	E	L	L	A	R	Y	P	H	R	L	I	D	I	R	D	P	A	E	S	Y	S	A	A	E	F	R	A	D	A	L	A	A	M	A	K	A	T	A	R	G	R	I	P	L	L	V	G	G	T
Template Known Secondary structure		T	T	T	T										S				S	S	S		B		T	T	S																					T	T								S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions