Job Description P0A858 Confidence 93.76% Date Thu Jan 5 11:06:58 GMT 2012 Rank 58 Aligned Residues 131 % Identity 23% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	L	K	D	I	G	A	Q	Y	I	I	I	G	H	S	E	R	R	T	Y	H	K	E	S	D	E	L	I	A	K	K	F	A	V	L	K	E	Q	G	L	T	P	V	L	C	I	G	E	T	E	A	E	N	E	A	G	K	T	E	E	V	C	A	R	Q	I	D	A	V	L	K	T	Q	G	A	A	A	F
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	R	L	S	R	E	K	G	I	D	G	F	I	.	.	.	.	.	.	.	.	V	P	D	L	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	L	S	F	V	P	L	G	A	P	T	S	T	R	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	L	I	C	E	A	A	D
Template Known Secondary structure								T	T						.	.	.	.	.	.	.	.		T	T																T	T									T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																.	.	.	.	.	.	.	170	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																								.																								.	.
Query SS confidence																																																								.																								.	.
Query Sequence		E	G	A	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	S	A	T	P	A	Q	A	Q	A	V	H	K	F	I	R	D	H	I	A	K	V	D	A	N	I	A	E	Q	V	I	I	Q	Y	G	G	S	V	.	N	A	S	N	A	A	E	L	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	S	.	.
Query Conservation																																																								.																								.	.
Alig confidence							.	.	.	.									.	.	.	.	.	.												.	.	.	.	.	.	.	.	.												.											.	.												.	.
Template Conservation							.	.	.	.									.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		E	M	T	Y	F	.	.	.	.	V	S	V	T	G	Y	E	R	.	.	.	.	.	.	I	K	K	K	V	E	E	Y	R	E	L	.	.	.	.	.	.	.	.	.	C	D	K	P	V	V	V	G	F	G	V	S	K	K	E	H	A	R	E	I	G	S	.	.	F	A	D	G	V	V	V	G	S	A	L	V	K
Template Known Secondary structure		S					.	.	.	.		S	S						.	.	.	.	.	.												.	.	.	.	.	.	.	.	.			S						S	S			S									T	.	.	T	S	S
Template Predicted Secondary structure							.	.	.	.									.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
		172	.	.	.	.					.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.										.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230
						237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	L	K	A	D	A	F	A	V	I	V	K	A	A	E	A	A	K	Q
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		L	A	G	Q	K	K	I	E	D	L	G	N	L	V	K	E	L	K	E	G	L	R
Template Known Secondary structure					T	T															T	T	B
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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