 |
Job Description | P0A858 | Confidence | 21.66% | Date | Thu Jan 5 11:06:58 GMT 2012 |
Rank | 237 | Aligned Residues | 54 |
% Identity | 13% | Template | c2e5cA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:nicotinamide phosphoribosyltransferase; |
PDBTitle: crystal structure of human nmprtase complexed with 5'-phosphoribosyl-2 1'-pyrophosphate
|
Resolution | 2.20 Å |
|
 |
  |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 230 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | Q | A | V | H | K | F | I | R | D | H | I | A | K | V | D | A | N | I | A | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
Q | V | I | I | Q | Y | G | G | S | V | N | A | S | N | A | A | E | L | F | A | Q | . |
. |
. |
. |
. |
. |
. |
P | D | I | D | G | A | L | V | G | G | A |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . | . |   |   |
|
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |   |   |
|   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|   |
Template Sequence |   |
N | P | L | D | T | V | L | K | V | L | E | I | L | G | K | K | F | P | V | T | E | N | S | K | G | Y | K | L | L | P | P | Y | L | R | V | I | Q | G | D | G | V | D | I | N | T | L | Q | E | I | V | E | G | M | K | Q | K | M | W | S | I | E | N | I | A | F | G | S | G | G | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|  |  |
| T | T | S |
|  |  |
|
| T | T |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | B |
| G | G | G |  |  |  |  |  | S |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
316 | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|