Job Description P0A858 Confidence 100.00% Date Thu Jan 5 11:06:58 GMT 2012 Rank 3 Aligned Residues 248 % Identity 42% Template c1yyaA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:triosephosphate isomerase; PDBTitle: crystal structure of tt0473, putative triosephosphate isomerase from2 thermus thermophilus hb8 Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	H	P	L	V	M	G	N	W	K	L	N	G	S	R	H	M	V	H	E	L	V	S	N	L	R	K	E	L	A	G	V	A	G	C	A	V	A	I	A	P	P	E	M	Y	I	D	M	A	K	R	E	A	E	G	S	H	I	M	L	G	A	Q	N	V	D	L	N	L	S	G	A	F	T	G	E	T	S	A
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		M	R	R	V	L	V	A	G	N	W	K	M	H	K	T	P	S	E	A	R	V	W	F	A	E	L	K	R	.	L	L	P	P	L	Q	S	E	A	A	V	L	P	A	F	P	I	L	P	V	A	K	E	V	L	A	E	T	Q	V	G	Y	G	A	Q	D	V	S	A	H	K	E	G	A	Y	T	G	E	V	S	A
Template Known Secondary structure													S																	.						S	S								G	G	G									T	T	S	S						S				S	S	S	S	S	S		T	T
Template Predicted Secondary structure																														.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	L	K	D	I	G	A	Q	Y	I	I	I	G	H	S	E	R	R	T	Y	H	K	E	S	D	E	L	I	A	K	K	F	A	V	L	K	E	Q	G	L	T	P	V	L	C	I	G	E	T	E	A	E	N	E	A	G	K	T	E	E	V	C	A	R	Q	I	D	A	V	L	K	T	Q	G	A	A	A	F	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	L	S	D	L	G	C	R	Y	A	I	V	G	H	S	E	R	R	R	Y	H	G	E	T	D	A	L	V	A	E	K	A	K	R	L	L	E	E	G	I	T	P	I	L	C	V	G	E	P	L	E	V	R	E	K	G	E	A	V	P	Y	T	L	R	Q	L	R	G	S	L	E	G	V	E	P	P	G	P	E
Template Known Secondary structure							T	T		S					S								S																	T	T																T	T														T	T	T				S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		G	A	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	S	A	T	P	A	Q	A	Q	A	V	H	K	F	I	R	D	H	I	A	K	V	D	A	.	N	I	A	E	Q	V	I	I	Q	Y	G	G	S	V	N	A	S	N	A	A	E	L	F	A	Q	P	D	I	D	G	A	L	V	G	G	A	S	L	K	A
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		A	L	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	N	A	T	P	E	D	A	E	A	M	H	Q	A	I	R	K	A	L	S	E	R	Y	G	E	A	F	A	S	R	V	R	I	L	Y	G	G	S	V	N	P	K	N	F	A	D	L	L	S	M	P	N	V	D	G	G	L	V	G	G	A	S	L	E	L
Template Known Secondary structure		G								G	G	G	S	S	S	S																													T	T							S	S			T	T	T						T	S	T	T							S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	A	V	I	V	K	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	F	L	A	L	L	R	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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