Job Description P0A858 Confidence 72.12% Date Thu Jan 5 11:06:58 GMT 2012 Rank 123 Aligned Residues 99 % Identity 16% Template c1toaA_ PDB info PDB header:binding protein Chain: A: PDB Molecule:protein (periplasmic binding protein troa); PDBTitle: periplasmic zinc binding protein troa from treponema pallidum Resolution 1.80 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170																.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	E	E	V	C	A	R	Q	I	D	A	V	L	K	T	Q	G	A	A	A	F	E	G	A	V	I	A	Y	E	P	V	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	G	T	G	K	S	A	T	P	A	Q	A	Q	A	V	H	K	F	I	R	D	H	I	A	K	V	D	A	N	I	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.																																																.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	L	D	K	L	D	A	Y	V	R	R	K	A	Q	S	L	P	A	E	.	.	R	R	V	L	V	T	A	H	D	A	F	G	Y	F	S	R	A	Y	G	F	E	V	K	G	L	Q	G	V	S	T	A	S	E	A	S	A	H	D	M	Q	E	L	A	A	F	I	A	.	.	.	.	.	.	.	.	.	.	Q
Template Known Secondary structure																	T	S		G	G	.	.	G								S										T									S	S		S	S																.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.																																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.											.
		203	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.												.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	V	I	I	Q	Y	G	.	G	S	V	N	A	S	N	A	A	E	L	F	A	Q	P	D	I	D	G	A	L	V	.	.	.	.	.	.	.	.	.	.	.	G	G	A	S	L	K	A	D	A	F	A	V	I	V	K	A
Query Conservation										.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	L	P	A	I	F	I	E	S	S	I	P	H	K	N	V	E	A	L	R	D	A	V	Q	A	R	G	H	V	V	Q	I	G	G	E	L	F	S	D	A	M	G	D	A	G	T	S	E	G	T	Y	V	G	M	V	T	H
Template Known Secondary structure		T	T		S						T	T	S		T												T	T	T											S	S	S				T	T	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions