 |
Job Description | P0AAW9 | Confidence | 3.88% | Date | Wed Jan 25 15:20:21 GMT 2012 |
Rank | 16 | Aligned Residues | 32 |
% Identity | 19% | Template | d1iwga8 |
SCOP info | Multidrug efflux transporter AcrB transmembrane domain
| Multidrug efflux transporter AcrB transmembrane domain
| Multidrug efflux transporter AcrB transmembrane domain
|
Resolution | 3.50 |
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | F | A | V | I | M | V | P | V | V | M | A | I | I | L | G | L | I | Y | G | L | G | E | V | F | N | I | F | S | G | V | G |
Query Conservation |   |
  |
|
|
|   |
|
|
|
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
F | S | V | M | L | V | V | P | L | G | V | I | G | A | L | L | A | A | T | F | R | G | L | T | N | D | V | Y | F | Q | V | G |
Template Known Secondary structure |   |
 |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
899 | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|