Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAW9
Confidence3.88%DateWed Jan 25 15:20:21 GMT 2012
Rank16Aligned Residues32
% Identity19%Templated1iwga8
SCOP infoMultidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40
Predicted Secondary structure 
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Query Sequence  VFAVIMVPVVMAIILGLIYGLGEVFNIFSGVG
Query Conservation   


 




   













 
 

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Template Conservation 
  
  
  

      
   
      
   
Template Sequence  FSVMLVVPLGVIGALLAATFRGLTNDVYFQVG
Template Known Secondary structure  GGGTT

B
Template Predicted Secondary structure 



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   899900.........910.........920.........930
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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