Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAW9
Confidence6.36%DateWed Jan 25 15:20:21 GMT 2012
Rank5Aligned Residues22
% Identity27%Templatec1afoB_
PDB info PDB header:integral membrane proteinChain: B: PDB Molecule:glycophorin a; PDBTitle: dimeric transmembrane domain of human glycophorin a, nmr,2 20 structures
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.......
Predicted Secondary structure 
Query SS confidence 





















Query Sequence  PVVMAIILGLIYGLGEVFNIFS
Query Conservation 


   













 
Alig confidence 





















Template Conservation    
 

















Template Sequence  PEITLIIFGVMAGVIGTILLIS
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 





















   71........80.........90..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions