|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | F | S | R | V | T | E | S | A | A | L | A | G | Y | K | W | L | G | R | G | D | K | . |
. |
. |
. |
. |
. |
N | T | A | D | G | A | A | V | N | A | M | R | I | M | L | N | Q | V | N | I | D | G | T | I | V | I | G | E | G | E | I | D | E | A | P | M | L | Y | I | G | E | K | V | G | T | G | R | G | D | A | V | D |
Query Conservation |   |
|   |
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |
|   |
|
|
| . | . | . | . | . | . |   |   |
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |
|   |   |   |
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   | . |   |
|   |   |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
Template Sequence |   |
R | L | R | S | V | A | E | N | L | A | A | E | A | A | A | F | V | R | G | R | R | A | E | V | F | D | P | V | T | V | V | D | T | D | T | E | R | L | L | R | D | R | L | A | Q | L | . |
R | P | G | D | P | I | L | G | E | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | R | V | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | S | T | T |
|
|  |  |
| T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | V | D | P | I | E | G | T | R | M | T | A | M | G | Q | A | N | A | L | A | V | L | A | V | G | D | K | G | C | F | L | N | . |
. |
A | P | D | M | Y | M | E | K | L | I | V | G | P | G | A | K | G | T | I | D | L | N | L | P | L | A | D | N | L | R | N | V | A | A | A | L | G | K | P | L | S | E | L | T | V |
Query Conservation |   |
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |
|
|
|
|   |
|   |   |
|   |
|
|   | . | . |
|
|
|   |
|
|   |
|
|
|
|
|
|   |   |   |
|   |
|
|
|   |
|
|   |   |   |
|
|   |   |
|
|   |
|
|
|
|   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |
|   |   |   |
|
|
|
|
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
W | V | L | D | P | I | D | G | T | V | N | F | V | Y | G | I | P | A | Y | A | V | S | I | G | A | Q | V | G | G | I | T | V | A | G | A | V | A | D | V | A | A | R | T | V | Y | S | A | A | T | G | L | G | A | H | L | T | D | E | R | G | R | H | V | L | R | . |
. |
. |
C | T | G | V | D | E | L | S | M | A | L | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|  |  |  |  |  |  | T |
| S |
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  | T | T |  |  |  |  |
|
| . | . | . |
|
|
|
|
|
| G | G | G |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . |
  |
  |   |
160 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
. | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | . |
. |
. |
. |
. |
. |
L | A | K | P | R | H | D | A | V | I | A | E | M | Q | Q | L | G | V | R | V | F | A | I | P | D | G | D | V | A | A | S | I | L | T | C | M | P | D | S | E | V | D | V | L | Y | G | I | G | G | A | P | E | G | V | V | S | A | . |
A | V | I | R | A | L | D | G | D | M |
Query Conservation |   |
  |
| . | . | . | . | . | . |
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |   |
|
|
|
|   |
|
|   |
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|   |
|
|
|   |   |
Alig confidence |   |
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|   | . | . | . |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |
|
|
|
|   |
|
Template Sequence |   |
G | T | G | F | G | Y | S | V | R | C | R | E | K | Q | A | E | L | L | A | H | V | V | P | L | V | R | D | V | R | R | I | G | S | A | A | L | D | L | C | M | V | A | A | . |
. |
. |
G | R | L | D | A | Y | Y | E | H | G | V | Q | V | W | D | C | A | A | G | A | L | I | A | A | E | A | G | A | R | V |
Template Known Secondary structure |   |
 |  |
|
|
| S |
|
| S |
| T |  |  |  |  |  |  |  |  |  |  | G | G | G | S | S |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  | . | . | . | T | S |
| S |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
|
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
  |