|   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
. | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
A | G | C | E | N | R | V | W | L | G | Y | T | V | A | E | N | G | . |
. |
. |
K | M | H | F | F | G | D | S | E | G | R | I | V | R | G | L | L | A | V | L | L | T | A | V | E | G | K | T | A | A | E | L | Q | A | Q | S | P | L | A | L | F | D | E | L | G | L | R | A | Q | L | S | A | S | R | S | Q | . |
. |
. |
. |
Query Conservation |   |
  |
|
|   |
|   |
|
|
|   |   |   |   |   |   |
|
| . | . | . |   |   |   |
|   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |
|
|
|
|
|   |
| . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|   |
|
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |
|   |
|
|   |
|   |   |   |
|
|   |
|
|   |
| . |
|
|
|   |
|   |   |   |
|   |
|
|
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   | . | . | . | . |   |   |
|   |
|   |   |
|
|   |
|
Template Sequence |   |
P | A | C | G | D | V | M | Q | L | Q | I | K | V | D | D | N | G | I | I | E | D | A | K | F | K | T | Y | G | C | G | S | A | I | A | . |
S | S | S | L | I | T | E | W | V | K | G | K | S | L | E | E | A | G | A | I | K | N | S | Q | I | A | E | E | L | E | . |
. |
. |
. |
L | P | P | V | K | V | H | C | S | I | L |
Template Known Secondary structure |   |
T | T | T | T |  |  |  |  |  |  |  |  |  |
| S | S | S | B |  |  |  |  |  |  |  |  |  | S | S | S | S |  |  |  | . |  |  |  |  |  |  |  |  | S | S | S | S | B |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  | T | . | . | . | . |
|
| S | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
|
. | 100 | . | . | . | . | . | . | . | . | . |
  |
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | N | A | L | S | E | A | I | I | A | A | T | K | Q |
Query Conservation |   |
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
Template Sequence |   |
A | E | D | A | I | K | A | A | I | A | D | Y | K | A | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |