Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGF2
Confidence10.08%DateThu Jan 5 11:28:56 GMT 2012
Rank56Aligned Residues44
% Identity20%Templatec2w3cA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:general vesicular transport factor p115; PDBTitle: globular head region of the human general vesicular2 transport factor p115
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90........ .100.........110....... ..120......
Predicted Secondary structure 

...





.





Query SS confidence 















. . .


















.








Query Sequence  SEGRIVRGLLAVLLTA. . . VEGKTAAELQAQSPLALFD. ELGLRAQLS
Query Conservation 


 




 


   ...  
 

 


  
   
  . 


   

Alig confidence 















...


















.








Template Conservation       
 

 
 


    
         
      
   

 
    
Template Sequence  EEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIE
Template Known Secondary structure  TTTT

S

SSS
T
Template Predicted Secondary structure 












Template SS confidence 















































   532.......540.........550.........560.........570.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions