Job Description P45551 Confidence 27.72% Date Thu Jan 5 12:03:10 GMT 2012 Rank 24 Aligned Residues 87 % Identity 5% Template c3id5E_ PDB info PDB header:transferase/ribosomal protein/rna Chain: E: PDB Molecule:pre mrna splicing protein; PDBTitle: crystal structure of sulfolobus solfataricus c/d rnp assembled with2 nop5, fibrillarin, l7ae and a split half c/d rna Resolution 4.01 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		D	K	D	I	C	K	G	M	M	Q	V	V	N	V	L	E	T	E	C	H	L	P	V	R	S	E	Q	G	T	M	A	M	T	H	M	A	S	A	L	M	R	S	R	R	G	E	E	I	E	P	L	D	N	E	L	L	A	E	L	A	Q	S	S	H	W	Q	.	A	V	V	Q	L	H	Q	V	L	L	K	E	F
Query Conservation																																																																				.
Alig confidence																																																																				.
Template Conservation
Template Sequence		Y	S	K	V	S	R	I	F	R	E	S	L	P	K	V	A	I	D	I	K	F	A	S	N	E	E	D	Y	Y	N	F	L	H	E	L	S	L	E	Y	T	R	R	K	L	R	S	A	A	Q	K	R	D	L	L	A	I	Q	A	V	R	A	M	D	D	I	D	K	T	I	N	L	F	S	E	R	L	R	E	W	Y
Template Known Secondary structure		S										T								T	T	S		S	S																						S		S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		94	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	V	N	P	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	H	F	P	E	L	D
Template Known Secondary structure		T	T	T		S	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions