Job Description P52123 Confidence 5.63% Date Thu Jan 5 12:05:26 GMT 2012 Rank 69 Aligned Residues 69 % Identity 12% Template c3mkqB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:coatomer subunit alpha; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		Q	E	C	W	K	N	L	S	S	N	L	T	K	E	T	F	L	P	L	V	I	E	P	F	S	I	N	D	I	F	K	A	H	L	M	F	.	.	.	.	.	.	.	A	S	I	S	F	F	W	G	K	S	I	M	S	E	N	E	N	V	A	F	K	A	F	.	.	.	.	.	.	H	R	A	A	E	L	F	D
Query Conservation																																						.	.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	T	W	E	R	L	I	Q	E	A	L	A	Q	G	N	A	S	L	A	E	M	I	Y	Q	T	Q	H	S	F	D	K	L	S	F	L	Y	L	V	T	G	D	V	N	K	L	S	K	M	Q	N	I	A	Q	T	R	E	D	F	G	S	M	L	L	N	T	F	Y	N	N	S	T	K	E	R	S	S	I	F	A
Template Known Secondary structure															T	T												T	T													T															T	T													T
Template Predicted Secondary structure
Template SS confidence
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
		190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		755	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions