Return to main results Retrieve Phyre Job Id

Job DescriptionP45771
Confidence79.58%DateThu Jan 5 12:03:45 GMT 2012
Rank21Aligned Residues48
% Identity19%Templatec2js4A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:upf0434 protein bb2007; PDBTitle: solution nmr structure of bordetella bronchiseptica protein2 bb2007. northeast structural genomics consortium target3 bor54
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60......
Predicted Secondary structure 







































Query SS confidence 




















































Query Sequence  SCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLEGQVCPA
Query Conservation   

 

  
  
 

 
 
 


 

 
     
                

 
Alig confidence 
















..




...

























Template Conservation   

 

  
        ..


  ...
   


 






 



 
    
Template Sequence  VCPVCKGRLEFQRAQAE. . LVCNA. . . DRLAFPVRDGVPIMLEAEARSLDAEA
Template Known Secondary structure  B
TTT

BTTTT..TT...TTTT


GGGSSSS

Template Predicted Secondary structure 











..


...












Template SS confidence 




















































   10.........20...... ...30. ........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions