Job Description P45771 Confidence 18.80% Date Thu Jan 5 12:03:45 GMT 2012 Rank 99 Aligned Residues 52 % Identity 19% Template c1xwhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:autoimmune regulator; PDBTitle: nmr structure of the first phd finger of autoimmune2 regulator protein (aire1): insights into apeced Resolution UNK

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	F	T	V	R	N	N	E	S	C	P	K	C	G	A	E	L	V	I	R	S	G	K	H	G	P	F	L	G	C	S	Q	Y	P	A	C	D	Y	V	R	P	L	K	S	S	A	D	G	H	I	V	K	V	L	E	G	Q	V	C	P	A	C
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		G	A	M	A	Q	K	N	E	D	E	C	A	V	C	R	.	.	.	.	.	.	.	.	D	G	G	E	L	I	C	C	D	G	.	.	.	C	P	R	A	F	H	L	A	C	L	S	P	P	L	R	E	I	P	S	G	T	W	R	C	S	S	C
Template Known Secondary structure							S				S	B	S	S	S	S	.	.	.	.	.	.	.	.			S	S					S	S	.	.	.							T	T	T	S	S	S			S	S			S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.									.	.	.	.	.	.	310	.	.	.				.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions