Job Description P0AD05 Confidence 95.30% Date Thu Jan 5 11:19:34 GMT 2012 Rank 10 Aligned Residues 128 % Identity 13% Template c3dinB_ PDB info PDB header:membrane protein, protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase Resolution 4.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	L	D	D	I	L	T	K	Y	N	T	D	H	A	I	L	D	V	A	E	L	D	G	L	L	T	A	V	L	S	S	P	Q	E	I	E	P	E	Q	W	L	V	A	V	W	G	G	A	D	Y	V	P	R	W	A	S	E	K	E	M	T	R	F	M	N	L	A	F	Q	H	M	A	D	T	A	E	R	L	N
Query Conservation
Alig confidence																	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	V	S	T	R	V	E	E	F	C	S	G	K	N	.	.	.	.	W	D	I	E	S	L	K	N	S	L	S	F	F	P	A	G	L	F	D	.	.	.	.	.	.	.	.	.	.	L	D	E	K	Q	F	S	S	S	E	E	L	H	D	Y	L	F	N	R	L	W	E	E	Y	Q	R	K	K	Q	E	I	G
Template Known Secondary structure								T	T	T	S	S		S	S	S	.	.	.	.											T			S	S		S	S	T	.	.	.	.	.	.	.	.	.	.	T								S	S																			G	G	G
Template Predicted Secondary structure																	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.					.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.											.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		E	F	P	E	Q	F	E	P	L	F	G	L	R	E	V	D	G	S	E	L	T	I	V	E	E	W	C	F	G	Y	M	R	G	V	A	L	S	D	W	.	.	.	S	T	L	P	D	S	L	K	P	A	L	E	A	I	A	L	H	G	T	E	E	N	F	E
Query Conservation																																									.	.	.
Alig confidence																												.													.	.	.
Template Conservation																												.
Template Sequence		E	D	Y	R	K	V	I	R	F	L	M	L	R	I	I	D	D	H	W	R	R	Y	L	E	E	V	.	E	H	V	K	E	A	V	Q	L	R	S	Y	G	Q	K	D	P	I	V	E	F	K	K	E	T	Y	Y	M	F	D	E	M	M	R	R	I	N	D	T
Template Known Secondary structure		G	G	G																								.							T	T	T	T	T	S	S	S			S	S
Template Predicted Secondary structure																												.
Template SS confidence
		744	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.		770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions