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Job DescriptionP0AD05
Confidence67.32%DateThu Jan 5 11:19:34 GMT 2012
Rank20Aligned Residues128
% Identity13%Templatec2fsgA_
PDB info PDB header:protein transportChain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: complex seca:atp from escherichia coli
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40. ........50.........60.........70.........80.........90
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Query Sequence  EWLDDILTKYNTDHAILDVAELDGLLTAVL. SSPQEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERL
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Template Sequence  DVFKATIDAYIPPQSLEEXWDIPGLQERLKNDFDLDLPIAEWLDKEP. . . . . . . ELHEETLRERILAQSIEVYQRKEEVV
Template Known Secondary structure  TTS
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   682.......690.........700.........710.........720........ .730.........740.........750....
 
   91.. ......100.........110.........120.........130 .........140.......
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Query Sequence  NEF. PEQFEPLFGLREVDGSELTIVEEWCFGYMRGVALSDW. . . STLPDSLKPALEAIALH
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Template Sequence  GAEXXRHFEKGVXLQTLDSLWKEHLAAX. DYLRQGIHLRGYAQKDPKQEYKRESFSXFAAX
Template Known Secondary structure 
.TTTTSS
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TTT
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   755....760.........770.........780.. .......790.........800.........810....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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