Job Description P38134 Confidence 96.82% Date Thu Jan 5 11:58:01 GMT 2012 Rank 89 Aligned Residues 143 % Identity 15% Template c1nijA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yjia; PDBTitle: yjia protein Resolution 2.00 Å

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		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	I	T	G	A	T	P	D	S	G	K	T	F	V	S	S	T	L	A	A	V	I	A	Q	S	D	Q	K	V	L	F	I	D	A	D	L	R	R	G	Y	S	H	N	L	F	T	V	S	N	E	H	G	L	S	E	Y	L	A	G	K	D	E	L	N	K	V	I	Q	H	F	G	K	G	G	F	D	V	I	T
Query Conservation
Alig confidence																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	.	.	Q	H	G	Y	K	I	A	V	I	E	N	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	V	S	V	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T
Template Known Secondary structure								S	S	S	S	S											S	.	.											S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										T	T	S							T
Template Predicted Secondary structure																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40																							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.				.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.										.	.	.	.	.	.	670	.	.	.	.	.			.	.	.	.
Predicted Secondary structure																										.	.	.																											.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																										.	.	.																											.	.	.	.	.	.	.	.	.													.	.
Query Sequence		R	G	Q	V	P	P	N	P	S	E	L	L	M	R	D	R	M	R	Q	L	L	E	W	A	.	.	.	N	D	H	Y	D	L	V	I	V	D	T	P	P	M	L	A	V	S	D	A	A	V	V	G	R	S	.	.	.	.	.	.	.	.	.	V	G	T	S	L	L	V	A	R	F	G	L	.	.	N	T	A	K
Query Conservation																										.	.	.																											.	.	.	.	.	.	.	.	.													.	.
Alig confidence														.												.	.	.																											.	.	.	.	.	.	.	.	.													.	.
Template Conservation														.
Template Sequence		N	G	C	I	C	C	S	R	S	N	E	L	.	E	D	A	L	L	D	L	L	D	N	L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M	N
Template Known Secondary structure		T	S						T	T	S			.														T	S				S								T	T													S																		T	T	T
Template Predicted Secondary structure														.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	S	L	S	M	Q	R	L	E	Q	A	G	V	N	I	K	G	A	I	L	N	G	V	I	K
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		Q	F	T	I	A	Q	S	Q	V	G	Y	A	D	R	.	.	.	.	I	L	L	T	K	T	D	V
Template Known Secondary structure												T		S		.	.	.	.						T	T	T
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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