89 c1nijA_ Probab=96.82   E-value=0.0091  Score=36.76  Aligned_columns=143  Identities=15%

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCCCHHHHHCCCCCHHHHEECCCCCCEEEEE
Q ss_conf             99973898877889999999999977993899965388988346638999888878762789988940016789868995
Q batch____       534 LMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVIT  613 (726)
Q Consensus       534 i~vtS~~~~eGkst~a~~LA~~~a~~g~rvLlID~dlr~~~l~~~~~~~~~~gl~~~L~~~~~~~~~i~~~~~~~l~il~  613 (726)
                      |.|-+.-.|.||||+-.+|...  ..|.|+.+|-.|+                      |+..++..+.......+.-|+
T Consensus         5 v~iitGfLGaGKTTll~~ll~~--~~~~~~avi~Nef----------------------g~~~iD~~ll~~~~~~v~~l~   60 (317)
T c1nijA_           5 VTLLTGFLGAGKTTLLRHILNE--QHGYKIAVIENEF----------------------GEVSVDDQLIGDRATQIKTLT   60 (317)
T ss_dssp             EEEEEESSSSSCHHHHHHHHHS--CCCCCEEEECSSC----------------------CSCCEEEEEECTTSCEEEEET
T ss_pred             EEEECCCCCCCHHHHHHHHHHC--CCCCEEEEEEECC----------------------CCCCHHHHHHHHCCCEEEEEC
T ss_conf             8998089888988999999842--6997389997166----------------------444205889840797299977


Q ss_pred             CCCCCCCHHHHHCCHHHHHHHHHH---HHHCCEEEEECCCCCCCHHHHHHHHH---------CCEEEEEEECCC--CCHH
Q ss_conf             689999978872547999999999---86099999948862244689999986---------696999830760--5799
Q batch____       614 RGQVPPNPSELLMRDRMRQLLEWA---NDHYDLVIVDTPPMLAVSDAAVVGRS---------VGTSLLVARFGL--NTAK  679 (726)
Q Consensus       614 ~g~~~~~~~~ll~~~~~~~~l~~l---~~~yD~ViiD~pP~~~~~d~~~la~~---------~D~~llvv~~~~--t~~~  679 (726)
                      .|-..-....-+ ...+.+++...   +..||+|||+++.+.--..-......         .|+++.||.+..  ....
T Consensus        61 ~GCiCC~~~~~~-~~~l~~l~~~~~~~~~~~d~i~IE~sG~a~p~~i~~~l~~~~~l~~~~~l~~vi~vvD~~~~~~~~~  139 (317)
T c1nijA_          61 NGCICCSRSNEL-EDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMN  139 (317)
T ss_dssp             TSCEEECTTSCH-HHHHHHHHHHHHHTSCCCSEEEEEEETTCCHHHHHHHHHHSHHHHHHEEEEEEEEEEETTTHHHHHH
T ss_pred             CCCEECCCHHHH-HHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECHHHHHHHH
T ss_conf             995421324778-9999999984125546866899808875798999988630820113089801789974026777663


Q ss_pred             HHHHHHHHHHHCCCCEEEEEEECCCC
Q ss_conf             99999999997699687999716475
Q batch____       680 EVSLSMQRLEQAGVNIKGAILNGVIK  705 (726)
Q Consensus       680 ~~~~a~~~l~~~~~~~~G~vln~v~~  705 (726)
                      ......+.+..+..    +|+|.+|.
T Consensus       140 ~~~~~~~Qi~~Ad~----ivlnk~D~  161 (317)
T c1nijA_         140 QFTIAQSQVGYADR----ILLTKTDV  161 (317)
T ss_dssp             HCHHHHHHHHTCSE----EEEECTTT
T ss_pred             HHHHHHHHHHHCCE----EEEECCCC
T ss_conf             22556445310778----99605566